Insertion junction: CLIP2.016194_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016194
Chromosome:chromosome 16
Location:3087913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664550 SHMT1 (1 of 1) PTHR11680//PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE // SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL; Serine hydroxymethyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCAAGACAACGCAACTGAAGATACTTCGTCGTAGACCCCTCGGGGCC
Internal bar code:TTTCGTGTCTGTCGGCATAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGCCTGATCGACTACG
Suggested primer 2:TTTCTGCCCTTCACCGACTC