| Common name: | SHMT1 |
| Defline: | (1 of 1) PTHR11680//PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE // SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL; Serine hydroxymethyltransferase |
| Description: | Serine hydroxymethyltransferase (gi:17066746, high light-inducible; Low-CO2 inducible gene revealed by cDNA array analyses; regulated by CCM1 [PMID: 15235119] |
| Synonyms: | g16043.t1,SHMT1,Cre16.g664550.t1.1 |
| Chromosome: | chromosome 16 |
We did not create a plasmid for this gene.
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre05.g248450 | CAH5 | Cre16.g664550 | SHMT1 | Mackinder et al. 2017 |
| Cre13.g577100 | ACP2 | Cre16.g664550 | SHMT1 | Mackinder et al. 2017 |
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.016194_1 | CLIP2.016194 | intron | 80 | 6.1 |
| CLIP2.016194_2 | CLIP2.016194 | intron | 80 | 6.1 |
| CLIP2.061166_1 | CLIP2.061166 | 5'UTR | 80 | 6.1 |
| CLIP2.061166_2 | CLIP2.061166 | 5'UTR | 80 | 6.1 |
| CLIP2.075729_1 | CLIP2.075729 | 3'UTR | 80 | 6.1 |
| CLIP2.075729_2 | CLIP2.075729 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.089117_1 | LMJ.RY0402.089117 | intron | 73 | 5.5 |
| LMJ.RY0402.119192_2 | LMJ.RY0402.119192 | 3'UTR | 73 | 5.5 |
| PFAM: | PF00464 |
| PANTHER: | PTHR11680 PTHR11680:SF10 |
| KEGG_ec: | EC:2.1.2.1 |
| KEGG_orthology: | K00600 |
| KOG: | KOG2467 |
| Gene ontology terms:: | GO:0016740 |
| Best arabidopsis TAIR name: | AT4G37930 |
| Best arabidopsis TAIR symbol: | SHM1,SHMT1,STM |
| Best arabidopsis TAIR defline: | serine transhydroxymethyltransferase 1 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.