Insertion junction: LMJ.RY0402.089117_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.089117
Chromosome:chromosome 16
Location:2995393
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g664550 SHMT1 (1 of 1) PTHR11680//PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE // SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL; Serine hydroxymethyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCTCATGTACGTCTGATGCACGCCGGC
Internal bar code:TCACGAGGGCCACCCCAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:73.5905
LEAP-Seq n confirming:248
LEAP-Seq n nonconfirming:89
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGACCCATACAACGCCG
Suggested primer 2:CAGGGAAAGAAGAGGGGAAC