Insertion junction: CLIP2.075729_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075729
Chromosome:chromosome 16
Location:3085615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664550 SHMT1 (1 of 1) PTHR11680//PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE // SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL; Serine hydroxymethyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTCTTCTCTCGCTACTAGCACTCAAGAAGGCAGACGGTCCAAAACCC
Internal bar code:AACTAGCTCTTAGGAGTGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1656
LEAP-Seq percent confirming:65.7895
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAAGAACACTGTGCCCG
Suggested primer 2:GAGGACACCGGTGTGAAGAG