Insertion junction: CLIP2.016242_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016242
Chromosome:chromosome 1
Location:4512438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030850 POA4 20S proteasome alpha subunit D; (1 of 1) K02731 - 20S proteasome subunit alpha 4 (PSMA7) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGGGCAGGCATGATGGGTAGGTGCAGGCAAGGGGGCTGCGGTAATGG
Internal bar code:TTTAACTAGATGTCCTGTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGTATGGTGTTGCACT
Suggested primer 2:GCAACTCCAAGACCATCCGA