Insertion junction: CLIP2.016368_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016368
Chromosome:chromosome 4
Location:2218406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220200 (1 of 1) PTHR16254:SF13 - K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTGTGGAGGGGCGTGTGGAGGTGTGTGTGGAGGAATGTGTGAGTAA
Internal bar code:GTCTAGTATAGTTGCGACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGGATTAGGGGTCGGA
Suggested primer 2:AACAGCAGGCAGATGGTCTC