Insertion junction: CLIP2.016763_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016763
Chromosome:chromosome 12
Location:5626153
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531400 NPHP4,NPH4,POC10 (1 of 1) K16478 - nephrocystin-4 (NPHP4); Proteome of centriole protein 10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGAGTACTGCCCCTTCACCACGCCGTCCAGCATGCGCTCGAGCATGAT
Internal bar code:AACGGTTGCGGGCGCATTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1585
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGAAGAACCGTGACCTG
Suggested primer 2:TGTGTGACTAACATGCGGCT