Insertion junction: CLIP2.016857_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016857
Chromosome:chromosome 17
Location:1388853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706050 SRR17 (1 of 1) IPR001190//IPR005515//IPR017448 - SRCR domain // Vitelline membrane outer layer protein I (VOMI) // SRCR-like domain; Possible cell surface glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTATCCTCATAGCATTGGGTTCACTATCCTCCCCTTGAAAGTTTGCTG
Internal bar code:TCATACTTTCATCCAGGTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3166
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCCAGGACACGAAGAG
Suggested primer 2:TCCGCTTTGTGGACTCTGAC