Gene: Cre17.g706050

Overview

Common name:SRR17
Defline:(1 of 1) IPR001190//IPR005515//IPR017448 - SRCR domain // Vitelline membrane outer layer protein I (VOMI) // SRCR-like domain; Possible cell surface glycoprotein
Description:Scavenger receptor cysteine-rich protein; contains ligand-binding SRCR domain found in speract/scavenger receptor (PMID: 14995912)
Synonyms:SRR17,g17113.t2
Chromosome:chromosome 17

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.012553_1 CLIP2.012553 intron 80 6.1
CLIP2.012553_2 CLIP2.012553 intron 80 6.1
CLIP2.016857_1 CLIP2.016857 intron 80 6.1
CLIP2.016857_2 CLIP2.016857 intron 80 6.1
CLIP2.019899_1 CLIP2.019899 intron 80 6.1
CLIP2.019899_2 CLIP2.019899 intron 80 6.1
CLIP2.026696_2 CLIP2.026696 intron 80 6.1
CLIP2.026696_3 CLIP2.026696 CDS/intron 80 6.1
CLIP2.026696_4 CLIP2.026696 intron 80 6.1
CLIP2.027384_3 CLIP2.027384 CDS 80 6.1
CLIP2.043512_1 CLIP2.043512 intron 80 6.1
CLIP2.043512_2 CLIP2.043512 intron 80 6.1
LMJ.RY0402.044888_1 LMJ.RY0402.044888 intron 73 5.5
LMJ.RY0402.046866_2 LMJ.RY0402.046866 intron 73 5.5
LMJ.RY0402.056159_1 LMJ.RY0402.056159 intron 73 5.5
LMJ.RY0402.084310_1 LMJ.RY0402.084310 intron 73 5.5
LMJ.RY0402.124150_1 LMJ.RY0402.124150 CDS 58 5.5
LMJ.RY0402.131479_1 LMJ.RY0402.131479 CDS 95 5.5
LMJ.RY0402.131479_2 LMJ.RY0402.131479 intron 95 5.5
LMJ.RY0402.135568_1 LMJ.RY0402.135568 CDS 95 5.5
LMJ.RY0402.135568_2 LMJ.RY0402.135568 CDS 95 5.5
LMJ.RY0402.140573_1 LMJ.RY0402.140573 intron 95 5.5
LMJ.RY0402.140573_2 LMJ.RY0402.140573 5'UTR 95 5.5
LMJ.RY0402.143223_2 LMJ.RY0402.143223 CDS 73 5.5
LMJ.RY0402.158442_1 LMJ.RY0402.158442 intron 58 5.5
LMJ.RY0402.158442_2 LMJ.RY0402.158442 CDS 73 5.5
LMJ.RY0402.172401_1 LMJ.RY0402.172401 intron 73 5.5
LMJ.RY0402.174325_1 LMJ.RY0402.174325 CDS 58 5.5
LMJ.RY0402.185652_4 LMJ.RY0402.185652 CDS 58 5.5
LMJ.RY0402.195460_1 LMJ.RY0402.195460 intron 73 5.5
LMJ.RY0402.203950_3 LMJ.RY0402.203950 intron 58 5.5
LMJ.RY0402.223164_1 LMJ.RY0402.223164 CDS 73 5.5
LMJ.RY0402.236656_1 LMJ.RY0402.236656 intron 95 5.5
LMJ.RY0402.236656_2 LMJ.RY0402.236656 CDS 95 5.5
LMJ.SG0182.011771_1 LMJ.SG0182.011771 MULTIPLE_SPLICE_VARIANTS 75 5.3

Gene Annotations

PFAM:PF00530
PANTHER: PTHR19331 PTHR19331:SF328
KEGG_ec:
KEGG_orthology:
KOG:KOG4462
Gene ontology terms::GO:0005044, GO:0016020
Best arabidopsis TAIR name:AT3G19020.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Leucine-rich repeat (LRR) family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 2 of 6 ( 74% confidence (FDR = 0.26))
Paromomycin, screen 3 of 6 ( 88% confidence (FDR = 0.12))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.