Insertion junction: CLIP2.026696_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026696
Chromosome:chromosome 17
Location:1387849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706050 SRR17 (1 of 1) IPR001190//IPR005515//IPR017448 - SRCR domain // Vitelline membrane outer layer protein I (VOMI) // SRCR-like domain; Possible cell surface glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGCTCCGAGGCTGCACTGCACCTATGCAATGTCACTGCCGTTGACCT
Internal bar code:CCACCACCTTGTCTAGGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1448
LEAP-Seq percent confirming:34.4828
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGACAGTGTTGCCAGCC
Suggested primer 2:CTCTTCGTGTCCTGGCATGT