Insertion junction: LMJ.RY0402.044888_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.044888
Chromosome:chromosome 17
Location:1363374
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g706050 SRR17 (1 of 1) IPR001190//IPR005515//IPR017448 - SRCR domain // Vitelline membrane outer layer protein I (VOMI) // SRCR-like domain; Possible cell surface glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGTGGCCGTGCTGGTGTATCACGCATGG
Internal bar code:GCCTTTACAGATATTCCGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:985
LEAP-Seq percent confirming:99.5115
LEAP-Seq n confirming:5500
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAACCGTCGCAACTACC
Suggested primer 2:AGGAACGGGGTTTCACTTCT