Insertion junction: CLIP2.026696_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.026696
Chromosome:chromosome 17
Location:1387847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706050 SRR17 (1 of 1) IPR001190//IPR005515//IPR017448 - SRCR domain // Vitelline membrane outer layer protein I (VOMI) // SRCR-like domain; Possible cell surface glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATGCAGAGCAAGCAACCATGAGGTAGGTAGCAAGTCCGCCCAACAAT
Internal bar code:CCACCACCTTGTCTAGGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5562
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTCGTGTCCTGGCATGT
Suggested primer 2:CAAAGACAGTGTTGCCAGCC