Insertion junction: LMJ.RY0402.223164_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.223164
Chromosome:chromosome 17
Location:1349220
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g706050 SRR17 (1 of 1) IPR001190//IPR005515//IPR017448 - SRCR domain // Vitelline membrane outer layer protein I (VOMI) // SRCR-like domain; Possible cell surface glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGGAAATCTCGGATGTGTTGCCATGGA
Internal bar code:ATCAGCGACTTGCCTCTCAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:569
LEAP-Seq percent confirming:97.8102
LEAP-Seq n confirming:536
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AATCACTCACTTGGTTCGGG
Suggested primer 2:CCTGCTTCTTTGGCAAAATC