Insertion junction: CLIP2.016903_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016903
Chromosome:chromosome 5
Location:688163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245351 (1 of 1) PF00059//PF00530//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACATCTTGACTTTCTTCAGTCCGCGAGTATAACTCTCGGGCCCTGAAT
Internal bar code:ACTCGCTGTACCTGTTATAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3005
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCCTTCGTTTGCAAG
Suggested primer 2:GACAATTGATCCGCGCTCAC