Gene: Cre05.g245351 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:	g5227.t1,Cre05.g245259.t1.2
Chromosome:	chromosome_5

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Orientation	Insertion Junction Feature	Confidence (%)
LMJ.RY0402.040507_1	LMJ.RY0402.040507	antisense	intron	73
LMJ.RY0402.046444_1	LMJ.RY0402.046444	sense	3'UTR	58
LMJ.RY0402.054202_2	LMJ.RY0402.054202	antisense	CDS	58
LMJ.RY0402.056638_1	LMJ.RY0402.056638	antisense	intron	95
LMJ.RY0402.056638_2	LMJ.RY0402.056638	antisense	intron	95
LMJ.RY0402.075113_1	LMJ.RY0402.075113	antisense	5'UTR	95
LMJ.RY0402.075113_2	LMJ.RY0402.075113	antisense	5'UTR	95
LMJ.RY0402.075298_1	LMJ.RY0402.075298	sense	intron	58
LMJ.RY0402.076240_1	LMJ.RY0402.076240	antisense	3'UTR	73
LMJ.RY0402.109721_1	LMJ.RY0402.109721	antisense	intron	73
LMJ.RY0402.127154_1	LMJ.RY0402.127154	antisense	CDS	73
LMJ.RY0402.144130_3	LMJ.RY0402.144130	sense	3'UTR	73
LMJ.RY0402.154368_1	LMJ.RY0402.154368	sense	CDS	95
LMJ.RY0402.154368_2	LMJ.RY0402.154368	sense	CDS	95
LMJ.RY0402.199351_1	LMJ.RY0402.199351	antisense	CDS/intron	73
LMJ.RY0402.206579_1	LMJ.RY0402.206579	antisense	intron	95
LMJ.RY0402.206579_2	LMJ.RY0402.206579	antisense	intron	95
LMJ.RY0402.228332_1	LMJ.RY0402.228332	sense	3'UTR	95
LMJ.RY0402.228332_2	LMJ.RY0402.228332	sense	3'UTR	95
LMJ.RY0402.257135_1	LMJ.RY0402.257135	sense	intron	73

Gene Annotations

PFAM:
PANTHER:	PTHR11177:SF44 PTHR11177
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 88% confidence (FDR = 0.12))

Paromomycin, screen 4 of 6 ( 93% confidence (FDR = 0.07))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.