Gene: Cre05.g245351

Overview

Common name:
Defline:(1 of 1) PF00059//PF00530//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4)
Description:
Synonyms:g5227.t1,Cre05.g245259.t1.2
Chromosome:chromosome 5

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.014581_1 CLIP2.014581 CDS 80 6.1
CLIP2.014581_2 CLIP2.014581 CDS 80 6.1
CLIP2.014815_5 CLIP2.014815 CDS 80 6.1
CLIP2.014815_6 CLIP2.014815 CDS 80 6.1
CLIP2.016903_1 CLIP2.016903 intron 80 6.1
CLIP2.016903_2 CLIP2.016903 intron 80 6.1
CLIP2.032483_1 CLIP2.032483 intron 80 6.1
CLIP2.032483_2 CLIP2.032483 intron 80 6.1
CLIP2.044755_1 CLIP2.044755 intron 80 6.1
CLIP2.044755_2 CLIP2.044755 intron 80 6.1
CLIP2.050027_3 CLIP2.050027 CDS 63 6.1
LMJ.RY0402.040507_1 LMJ.RY0402.040507 intron 73 5.5
LMJ.RY0402.046444_1 LMJ.RY0402.046444 3'UTR 58 5.5
LMJ.RY0402.054202_2 LMJ.RY0402.054202 CDS 58 5.5
LMJ.RY0402.056638_1 LMJ.RY0402.056638 intron 95 5.5
LMJ.RY0402.056638_2 LMJ.RY0402.056638 intron 95 5.5
LMJ.RY0402.075113_1 LMJ.RY0402.075113 5'UTR 95 5.5
LMJ.RY0402.075113_2 LMJ.RY0402.075113 5'UTR 95 5.5
LMJ.RY0402.075298_1 LMJ.RY0402.075298 intron 58 5.5
LMJ.RY0402.076240_1 LMJ.RY0402.076240 3'UTR 73 5.5
LMJ.RY0402.109721_1 LMJ.RY0402.109721 intron 73 5.5
LMJ.RY0402.127154_1 LMJ.RY0402.127154 CDS 73 5.5
LMJ.RY0402.144130_3 LMJ.RY0402.144130 3'UTR 73 5.5
LMJ.RY0402.154368_1 LMJ.RY0402.154368 CDS 95 5.5
LMJ.RY0402.154368_2 LMJ.RY0402.154368 CDS 95 5.5
LMJ.RY0402.199351_1 LMJ.RY0402.199351 CDS/intron 73 5.5
LMJ.RY0402.206579_1 LMJ.RY0402.206579 intron 95 5.5
LMJ.RY0402.206579_2 LMJ.RY0402.206579 intron 95 5.5
LMJ.RY0402.228332_1 LMJ.RY0402.228332 3'UTR 95 5.5
LMJ.RY0402.228332_2 LMJ.RY0402.228332 3'UTR 95 5.5
LMJ.RY0402.257135_1 LMJ.RY0402.257135 intron 73 5.5

Gene Annotations

PFAM:PF00059, PF00530, PF00704, PF14295
PANTHER: PTHR11177 PTHR11177:SF157
KEGG_ec:EC:3.2.1.14
KEGG_orthology:
KOG:
Gene ontology terms::GO:0004553, GO:0004568, GO:0005044, GO:0005515, GO:0005576, GO:0005975, GO:0006032, GO:0006508, GO:0016020
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 88% confidence (FDR = 0.12))
Paromomycin, screen 4 of 6 ( 93% confidence (FDR = 0.07))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.