Insertion junction: LMJ.RY0402.206579_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.206579
Chromosome:chromosome 5
Location:1221136
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g245351 (1 of 1) PF00059//PF00530//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAAGGCAGCAATCCCGGCACATGGTAA
Internal bar code:TCGGAGGTACGACAGGGCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:98.6621
LEAP-Seq n confirming:2876
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCTTTGTTGCTTTGGCA
Suggested primer 2:TGCATCTGGAACTGCTTTTG