Insertion junction: CLIP2.016908_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016908
Chromosome:chromosome 16
Location:5446088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGGAGGGTAAGTAAAACTGCATTCATTCGGCGCAAGTGGAGAGGTT
Internal bar code:CCCCGATAATAGGTCAGGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3230
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATTGCCGTCTTCTGCCA
Suggested primer 2:CGCCTCAAGGACTCACCAAT