Insertion junction: CLIP2.017167_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017167
Chromosome:chromosome 5
Location:1538248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234663 SRTC1,SRTC (1 of 1) PTHR11085:SF23 - NAD-DEPENDENT HISTONE DEACETYLASE HST4; Sir2-like NADH dependent histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCGACCCGCCAGCTGACGTGGTACTCTCCGGAACGGCGCGGGCCG
Internal bar code:TCTAGTTGCGCATGATCCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1598
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CACTAAGCCTCCTCCCTCCT
Suggested primer 2:TTCCCTGTACCACATGTCGC