| Common name: | SRTC1,SRTC |
| Defline: | (1 of 1) PTHR11085:SF23 - NAD-DEPENDENT HISTONE DEACETYLASE HST4; Sir2-like NADH dependent histone deacetylase |
| Description: | Similar to classes III sirtuins |
| Synonyms: | Cre24.g768800.t1.1,g5382.t1,SRTC |
| Chromosome: | chromosome 5 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.017167_1 | CLIP2.017167 | intron | 80 | 6.1 |
| CLIP2.017167_2 | CLIP2.017167 | intron | 80 | 6.1 |
| CLIP2.021192_1 | CLIP2.021192 | CDS | 80 | 6.1 |
| CLIP2.021192_2 | CLIP2.021192 | CDS | 80 | 6.1 |
| CLIP2.027412_1 | CLIP2.027412 | CDS | 80 | 6.1 |
| CLIP2.027412_2 | CLIP2.027412 | CDS | 80 | 6.1 |
| CLIP2.038224_1 | CLIP2.038224 | CDS | 80 | 6.1 |
| CLIP2.038224_2 | CLIP2.038224 | CDS | 80 | 6.1 |
| CLIP2.047851_1 | CLIP2.047851 | intron | 80 | 6.1 |
| CLIP2.047851_2 | CLIP2.047851 | intron | 80 | 6.1 |
| LMJ.RY0402.059255_1 | LMJ.RY0402.059255 | intron | 73 | 5.5 |
| LMJ.RY0402.086449_1 | LMJ.RY0402.086449 | CDS | 73 | 5.5 |
| LMJ.RY0402.125568_1 | LMJ.RY0402.125568 | intron | 73 | 5.5 |
| LMJ.RY0402.254328_1 | LMJ.RY0402.254328 | intron | 95 | 5.5 |
| LMJ.RY0402.254328_2 | LMJ.RY0402.254328 | intron | 95 | 5.5 |
| PFAM: | PF02146 |
| PANTHER: | PTHR11085 PTHR11085:SF23 |
| KEGG_ec: | EC:3.5.1.98 |
| KEGG_orthology: | |
| KOG: | KOG2682 |
| Gene ontology terms:: | GO:0042309, GO:0050825, GO:0050826, GO:0070403 |
| Best arabidopsis TAIR name: | AT5G09230.3 |
| Best arabidopsis TAIR symbol: | AtSRT2,SRT2 |
| Best arabidopsis TAIR defline: | sirtuin 2 |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| LAT042C03, screen 1 of 1 ( 71% confidence (FDR = 0.29)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.