Insertion junction: CLIP2.047851_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047851
Chromosome:chromosome 5
Location:1536478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234663 SRTC1,SRTC (1 of 1) PTHR11085:SF23 - NAD-DEPENDENT HISTONE DEACETYLASE HST4; Sir2-like NADH dependent histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGAATGTAACCCCCATGCTCGCCTCCCCCAACCCTCGCCCCTGCAGG
Internal bar code:GCAGCAAACTCAAAGTAATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2184
LEAP-Seq percent confirming:78.4314
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GACTACCGTATGCTGGAGGC
Suggested primer 2:CTTTGGGTGCGTGAAACAGG