Insertion junction: CLIP2.021192_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021192
Chromosome:chromosome 5
Location:1532510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234663 SRTC1,SRTC (1 of 1) PTHR11085:SF23 - NAD-DEPENDENT HISTONE DEACETYLASE HST4; Sir2-like NADH dependent histone deacetylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCCGCGGCAGCCGCAGCGGCAGCGGTGGCGGCCGGGCTGCCTGCCC
Internal bar code:CCCCCGTATTTCCAGGGGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2223
LEAP-Seq percent confirming:94.3396
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACAGCGCCGAAAAGTCC
Suggested primer 2:CGTTATGAATGGCGCACCTG