Insertion junction: CLIP2.017983_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017983
Chromosome:chromosome 12
Location:9435943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541100 OTU7 (1 of 1) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED; OTU-like cysteine protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACCCGGTGTTCATTCGCGGCACAGGACATAGCCCATAAACATCTACC
Internal bar code:GGTCATATCTAACTTACAGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGAGTAGCTGCGTTGGT
Suggested primer 2:ACTGATGCGACTGTTGAGCA