Insertion junction: CLIP2.018030_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.018030
Chromosome:chromosome 2
Location:5812838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTCGTTCGAAGCAGCCCATGCCGGTAACCTCCGTGCCGTGGCGTGTG
Internal bar code:TTACGACGCTGACTGTATTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTTGCAGGTATCACGTG
Suggested primer 2:GACCTTGAGCAAGATGGCCT