Insertion junction: CLIP2.018514_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.018514
Chromosome:chromosome 12
Location:3154511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500500 SMT1,SMT2,STM1 (1 of 1) 2.1.1.143 - 24-methylenesterol C-methyltransferase / SMT(2); Sterol-C24-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGTCAAGGTGCTTTGCGGTGCTGAGGAGCTGTCAGGGTATGCTGGCA
Internal bar code:GATCGGACGATGCATGAGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2492
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGGACGTGTTCTACAGC
Suggested primer 2:CGACATACACGCAATGCAGG