Insertion junction: CLIP2.019035_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.019035
Chromosome:chromosome 1
Location:2223363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012450 (1 of 1) PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCAGAGCATCGTGGAGATGGGCTTCAGCGCCGCCCGCGCCGAGGAGGC
Internal bar code:ATGGCGTATACAGGATCTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:113
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGAGATGGAGCCAGTGGA
Suggested primer 2:TGTCCTCGTTTGTCCTCTGC