Insertion junction: CLIP2.019180_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.019180
Chromosome:chromosome 12
Location:6986741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560900 CPLD35,AOF7 Flavin-containing amine oxidase. Conserved in plant lineage and Diatoms; (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGCGGACCTGGCACAGCCTCGCAGAGCCCAGCAGTATTCCCACCATC
Internal bar code:TGTGGGACGGACAACATGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2598
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCATTTTCGCCCCGATC
Suggested primer 2:GCACCACACTTTGCACTGAG