Insertion junction: CLIP2.019863_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.019863
Chromosome:chromosome 1
Location:7761650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054700 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCAGGTGGAAGGGGCTAGGCGGCGTGAGGGCACCCGGCAGGCACAGC
Internal bar code:CGGGCTTCATGGCAGGTTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:311
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGTGTGTGTGTGCGTA
Suggested primer 2:GGTGGGGCTTTGTACGGTAA