Insertion junction: CLIP2.019876_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.019876
Chromosome:chromosome 12
Location:5313221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g528300 5'UTR
Cre12.g528350 (1 of 1) IPR000408//IPR001810//IPR009091 - Regulator of chromosome condensation, RCC1 // F-box domain // Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGGCAAAGTGGCACCATCCCTTGCCGACCTAGCCTTTTAGTCACAA
Internal bar code:GTGGTTCCCGCCATGGTGACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3625
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACTCCAGATTGCGCACA
Suggested primer 2:ACACACGAGGCGCAATAAGA