Insertion junction: CLIP2.020342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020342
Chromosome:chromosome 6
Location:4907710
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280700 (1 of 2) PF10197 - N-terminal domain of CBF1 interacting co-repressor CIR (Cir_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACTGGACCCGCCCACCCTGTGCTTTCCTCCCGCGTATCAGACCCCCG
Internal bar code:AACGCCTCCGAGTGCAGGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1436
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATCTTGTCGCCCTCCAC
Suggested primer 2:GCGGGAAGTTGCACAATGTT