Gene: Cre06.g280700
Overview
| Common name: | |
| Defline: | (1 of 2) PF10197 - N-terminal domain of CBF1 interacting co-repressor CIR (Cir_N) |
| Description: | |
| Synonyms: | g6529.t1,Cre06.g280700.t1.1 |
| Chromosome: | chromosome 6 |
Protein Localization
A plasmid for expressing Cre06.g280700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre06.g280700-Venus-3xFLAG
Imaged strain: CSI_LW07C6
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
nucleus/nucleoplasm
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.020342_1 | CLIP2.020342 | intron | 80 | 6.1 |
| CLIP2.020342_2 | CLIP2.020342 | intron | 80 | 6.1 |
| CLIP2.030362_1 | CLIP2.030362 | intron | 80 | 6.1 |
| CLIP2.030362_2 | CLIP2.030362 | intron | 80 | 6.1 |
| CLIP2.076638_1 | CLIP2.076638 | CDS | 63 | 6.1 |
| LMJ.RY0402.056491_1 | LMJ.RY0402.056491 | intron | 95 | 5.5 |
| LMJ.RY0402.056491_2 | LMJ.RY0402.056491 | intron | 95 | 5.5 |
| LMJ.RY0402.104860_1 | LMJ.RY0402.104860 | intron | 73 | 5.5 |
| LMJ.RY0402.215794_1 | LMJ.RY0402.215794 | intron | 95 | 5.5 |
| LMJ.RY0402.215794_2 | LMJ.RY0402.215794 | CDS | 95 | 5.5 |
| LMJ.SG0182.005464_1 | LMJ.SG0182.005464 | CDS | 75 | 5.3 |
Gene Annotations
| PFAM: | PF10197 |
| PANTHER: | PTHR24633:SF12 PTHR24633 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG3794 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G19190 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | zinc knuckle (CCHC-type) family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.