Insertion junction: CLIP2.020342_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020342
Chromosome:chromosome 6
Location:4908226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280700 (1 of 2) PF10197 - N-terminal domain of CBF1 interacting co-repressor CIR (Cir_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGACTTCAGCGCCAAAGCTTTGACTCGCTCGTGATCATGGGAACGCA
Internal bar code:AGCAAGATAACGACTTGACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2830
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGAAGTTGCACAATGTT
Suggested primer 2:TTGATCTTGTCGCCCTCCAC