Insertion junction: CLIP2.020347_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020347
Chromosome:chromosome 16
Location:2806564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662500 (1 of 1) PTHR12197//PTHR12197:SF138//PTHR13078 - SET AND MYND DOMAIN CONTAINING // SET AND MYND DOMAIN-CONTAINING PROTEIN DDB_G0292140 // FAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAATCTTGATGCAGTCTCCATACAGCATTCCCAATCTTCCCTACTTGC
Internal bar code:ACACATCGATTCAGATAAGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:926
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAAGTCCACCGCATTGC
Suggested primer 2:CATCTTTGCATCCACCCCCT