Insertion junction: CLIP2.020375_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020375
Chromosome:chromosome 10
Location:1600010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429100 Putative prolyl-tRNA synthetase; (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGTCCCATTCCCACTCCTCCTTCCCTCATACTCGTGTACTCCCAAACC
Internal bar code:CAACCTGGTTGCGCCTGTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:405
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCTTAATGCGCTGGTCG
Suggested primer 2:CGTAGTTTGCTGTGCGATCG