Insertion junction: CLIP2.020581_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020581
Chromosome:chromosome 16
Location:3660043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677026 PDH1 Pyruvate dehydrogenase E1 beta subunit; (1 of 2) K00162 - pyruvate dehydrogenase E1 component beta subunit (PDHB, pdhB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGAACGCGCTGACACTTGGCCCTCTCGCAGGCGGGTTTCACGGGTAT
Internal bar code:CGTAGTCATTATCGAGCCCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATTCTGATTCGTGCACC
Suggested primer 2:TGCTCTTGACACGCGTAGTT