Gene: Cre16.g677026
Overview
| Common name: | PDH1 |
| Defline: | Pyruvate dehydrogenase E1 beta subunit; (1 of 2) K00162 - pyruvate dehydrogenase E1 component beta subunit (PDHB, pdhB) |
| Description: | Pyruvate dehydrogenase (lipoamide); pyruvate dehydrogenase E1 beta subunit (EC 1.2.4.1), probable mitochondrial precursor by homology to 0850; dominant of 2 potential splicing variants (minor variant PDH1b) |
| Synonyms: | Cre01.g063700.t1.2,PDH1,g16134.t1,Cre01.g063700.t1.1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g677026 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g677026-Venus-3xFLAG
Imaged strain: CSI_LW02C2
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
mitochondria
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre05.g248450 | CAH5 | Cre16.g677026 | PDH1 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.020581_1 | CLIP2.020581 | intron | 80 | 6.1 |
| CLIP2.037711_1 | CLIP2.037711 | intron | 80 | 6.1 |
| CLIP2.037711_2 | CLIP2.037711 | intron | 80 | 6.1 |
| CLIP2.057357_1 | CLIP2.057357 | 3'UTR | 80 | 6.1 |
| CLIP2.057357_2 | CLIP2.057357 | 3'UTR | 80 | 6.1 |
| CLIP2.058779_1 | CLIP2.058779 | 3'UTR | 80 | 6.1 |
| CLIP2.076241_1 | CLIP2.076241 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.151952_1 | LMJ.RY0402.151952 | intron | 58 | 5.5 |
Gene Annotations
| PFAM: | PF02779, PF02780 |
| PANTHER: | PTHR11624 |
| KEGG_ec: | EC:1.2.4.1 |
| KEGG_orthology: | K00162 |
| KOG: | KOG0524 |
| Gene ontology terms:: | GO:0003824, GO:0008152 |
| Best arabidopsis TAIR name: | AT5G50850 |
| Best arabidopsis TAIR symbol: | MAB1 |
| Best arabidopsis TAIR defline: | Transketolase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.