Insertion junction: CLIP2.058779_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.058779
Chromosome:chromosome 16
Location:3656344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677026 PDH1 Pyruvate dehydrogenase E1 beta subunit; (1 of 2) K00162 - pyruvate dehydrogenase E1 component beta subunit (PDHB, pdhB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGCTTTCAGCCCACCCTCGCCAGCGGTCTGACACTGTCCAGCCAACC
Internal bar code:TGAATGATACTCGCTGTCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1609
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAGCATTGCATGAGCGG
Suggested primer 2:AGGTGGCTGGGTTGATAACG