Insertion junction: CLIP2.037711_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.037711
Chromosome:chromosome 16
Location:3657997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677026 PDH1 Pyruvate dehydrogenase E1 beta subunit; (1 of 2) K00162 - pyruvate dehydrogenase E1 component beta subunit (PDHB, pdhB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATCCTTGCAACCCCGCCCCGCGCCCCCCGCTCCTGCACCCACCTCGC
Internal bar code:GGTTATCGCCGCTTAGTAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1770
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGTTACGTTCCCAGTCA
Suggested primer 2:TGATGGAGCGCAGGTTGATT