Insertion junction: CLIP2.076241_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076241
Chromosome:chromosome 16
Location:3656673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677026 PDH1 Pyruvate dehydrogenase E1 beta subunit; (1 of 2) K00162 - pyruvate dehydrogenase E1 component beta subunit (PDHB, pdhB) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTGTACGTCAGTTACATGCTGCGGACGTAGCCAGTTGAGTTTGGAGG
Internal bar code:TATAGTGTTGAACCCGAGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2911
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACAGGGCAAACACCATG
Suggested primer 2:GAAGAGCATTGCATGAGCGG