Insertion junction: CLIP2.020649_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020649
Chromosome:chromosome 10
Location:1433623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTGCATTTGGCCCACGTCCATTCTTGGCCCGCCGCCCGCTGCCAGCA
Internal bar code:CGCCCCTGGTGTTGGTTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1582
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCGCGATGTGGGATATT
Suggested primer 2:TCAGGACTGCCGGAAGAAAC