Insertion junction: CLIP2.021200_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.021200
Chromosome:chromosome 1
Location:2233015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012450 (1 of 1) PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCTGAGGCACTCGCAGCGGCCATGTCCAGTCTACCCACCCCAGCAAC
Internal bar code:GTCCAAGTGGGTTACATTCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2380
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAACCGCTCATCTATCGA
Suggested primer 2:CTAGTGCGGATGGCTGAGAG