Insertion junction: CLIP2.021357_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021357
Chromosome:chromosome 9
Location:2121064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396000 NAR5,NRT2C Nitrate/nitrite transporter; (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGTACCCACACATAGATAGCCACACCCATCCATATAACCTGTGCTGC
Internal bar code:TGCCTTCTTAGCCGAGCAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1159
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCATACCGTTCACGCATG
Suggested primer 2:GGACTACCGCGACCTGAAAA