Insertion junction: CLIP2.021421_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021421
Chromosome:chromosome 2
Location:4431600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106000 (1 of 8) IPR002867 - IBR domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACAGTATGCAATGCCTGTCATGCCATGCTCCTGCCGTACACGCACGC
Internal bar code:GGTCATACAAACATCAAGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1274
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATGCAAGCAACCCCAC
Suggested primer 2:GCAACAGATCCGAGTCCCAA