Insertion junction: CLIP2.021472_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021472
Chromosome:chromosome 17
Location:2949684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719500 AOF9 (1 of 2) 1.3.99.29 - Phytoene desaturase (zeta-carotene-forming) / 2-step phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCGTGTGTGTGTCCCCGTGGTCCCCCTGCAGCCCTTCTTCACCGCCT
Internal bar code:AGTGTCTTAGATTGTGGGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:774
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCACACACACACACACA
Suggested primer 2:TTGAGACCTTCCCCATGTGC