Insertion junction: CLIP2.021481_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021481
Chromosome:chromosome 17
Location:3782961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726850 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2); Similar to Sjogren Syndrome Antigen A2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGACTGTACCCCCTCCCTGCAGGTATCGTGGTCCTGGCCATGTGCGC
Internal bar code:CGGTTATTTACAGTGTGAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3731
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTCCGAGTCTGAATCG
Suggested primer 2:CTGACTGGGCATCCGGATAC