Insertion junction: CLIP2.021932_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021932
Chromosome:chromosome 1
Location:454799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g002787 SRR24A,SRR24 (1 of 1) PF00059//PF00530//PF00704//PF03762 - Lectin C-type domain (Lectin_C) // Scavenger receptor cysteine-rich domain (SRCR) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // Vitelline membrane outer layer protein I (VOMI) (VOMI); Scavenger receptor cysteine-rich protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAGGCTGCAGCCTTGTAGCGCCCCATGCTCCAGAACTGGCCCGCGCT
Internal bar code:TAAACAGATGTGGTACCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2754
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCAACATTCCCCCAACC
Suggested primer 2:TGCATATGTCTCCGCCGTAC