Insertion junction: CLIP2.022004_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022004
Chromosome:chromosome 16
Location:3293189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666334 RFS1 (1 of 1) 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase; putative raffinose synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGCCATTGATTGGGCGACTGTAGGGTCTGTGTGAGGGTTACCTGCA
Internal bar code:TGTGAACGTCGAATATAGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2964
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GATACATCAGGACGCCGAGG
Suggested primer 2:CCGGTGTACGTGTCTGACAA