Gene: Cre16.g666334

Overview

Common name:	RFS1
Defline:	(1 of 1) 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase; putative raffinose synthase
Description:	EC 2.4.1.82; GH36C family glycoside hydrolase, putative galactinol--sucrose galactosyltransferase = raffinose synthase = 1-alpha-D-galactosyl-myo-inositol:sucrose 6-a-D-galactosyltransferase; this gene contains in its long 5th intron a gene on the other strand, MAD1; this organization is conserved in Chlorophyceae and Trebouxiophyceae
Synonyms:	RFS1,g16082.t1,Cre16.g666450.t3.1
Chromosome:	chromosome 16

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.015038_1	CLIP2.015038	intron	80	6.1
CLIP2.015038_2	CLIP2.015038	intron	80	6.1
CLIP2.021120_1	CLIP2.021120	CDS	80	6.1
CLIP2.021120_2	CLIP2.021120	CDS	80	6.1
CLIP2.022004_1	CLIP2.022004	intron	80	6.1
CLIP2.022004_2	CLIP2.022004	intron	80	6.1
CLIP2.039269_1	CLIP2.039269	intron	80	6.1
CLIP2.039269_2	CLIP2.039269	intron	80	6.1
CLIP2.052897_1	CLIP2.052897	intron	80	6.1
CLIP2.052897_2	CLIP2.052897	intron	80	6.1
CLIP2.061829_1	CLIP2.061829	intron	80	6.1
CLIP2.061829_2	CLIP2.061829	intron	80	6.1
CLIP2.070776_1	CLIP2.070776	intron	80	6.1
LMJ.RY0402.067800_1	LMJ.RY0402.067800	intron|outside_mRNA	73	5.5
LMJ.RY0402.069483_1	LMJ.RY0402.069483	3'UTR|outside_mRNA	73	5.5
LMJ.RY0402.072856_1	LMJ.RY0402.072856	3'UTR|outside_mRNA	95	5.5
LMJ.RY0402.072856_2	LMJ.RY0402.072856	3'UTR|outside_mRNA	95	5.5
LMJ.RY0402.095090_1	LMJ.RY0402.095090	3'UTR|outside_mRNA	73	5.5
LMJ.RY0402.108053_1	LMJ.RY0402.108053	intron|outside_mRNA	73	5.5
LMJ.RY0402.139907_1	LMJ.RY0402.139907	3'UTR|outside_mRNA	58	5.5
LMJ.RY0402.149673_2	LMJ.RY0402.149673	5'UTR|outside_mRNA	73	5.5
LMJ.RY0402.177627_1	LMJ.RY0402.177627	CDS|outside_mRNA	95	5.5
LMJ.RY0402.177627_2	LMJ.RY0402.177627	CDS|outside_mRNA	95	5.5
LMJ.RY0402.191048_1	LMJ.RY0402.191048	3'UTR|outside_mRNA	73	5.5
LMJ.RY0402.229701_2	LMJ.RY0402.229701	3'UTR|outside_mRNA	95	5.5
LMJ.RY0402.229701_3	LMJ.RY0402.229701	3'UTR|outside_mRNA	95	5.5
LMJ.RY0402.236316_2	LMJ.RY0402.236316	3'UTR|intron|outside_mRNA	73	5.5

Gene Annotations

PFAM:	PF05691
PANTHER:	PTHR31268
KEGG_ec:	EC:2.4.1.82
KEGG_orthology:	K06617
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:	AT3G57520
Best arabidopsis TAIR symbol:	AtSIP2,SIP2, AtSIP1,SIP1
Best arabidopsis TAIR defline:	seed imbibition 2
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.