Insertion junction: LMJ.RY0402.072856_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.072856
Chromosome:chromosome 16
Location:3201349
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g666334 RFS1 (1 of 1) 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase; putative raffinose synthase 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCACAGCGTGTCATCAGAGTAAGACAAG
Internal bar code:GATGTCGACCTCACATGCGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:99.6163
LEAP-Seq n confirming:3894
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGTTGACGGACGGTAG
Suggested primer 2:GATGCCGGAGCTCTGTAGAC