Insertion junction: CLIP2.052897_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.052897
Chromosome:chromosome 16
Location:3302378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666334 RFS1 (1 of 1) 2.4.1.82 - Galactinol--sucrose galactosyltransferase / Raffinose synthase; putative raffinose synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATGAAATGATTCCAACGACTCACTTGACTCAGTGAAAACTGACTACAC
Internal bar code:TGAATGTGTAAATACATACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2453
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATACTTCCGTTGTGGCA
Suggested primer 2:CCTTGAACCTCCCAGAGCAG