Insertion junction: CLIP2.022011_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022011
Chromosome:chromosome 17
Location:1306871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705450 LCI26 Low-CO2-induced U-box protein; (1 of 1) PTHR22849//PTHR22849:SF45 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGTGCGTGGCGTGCAGTCACGGCGTGCCGGCCGTACTGGGCTGCCAT
Internal bar code:CCAGGCTCTTACAATTCTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATTAGCCCGTGGTGTCA
Suggested primer 2:TTCTTTTGCATTCAGGGCGC